J3_6ORD_049
3D structure
- PDB id
- 6ORD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GCGGGAC*GGCAG*CC
- Length
- 14 nucleotides
- Bulged bases
- 6ORD|1|YA|A|1384
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6ORD_049 not in the Motif Atlas
- Homologous match to J3_7RQB_009
- Geometric discrepancy: 0.0731
- The information below is about J3_7RQB_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_04858.2
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-cWW
- Number of instances in this motif group
- 3
Unit IDs
6ORD|1|YA|G|1344
6ORD|1|YA|C|1345
6ORD|1|YA|G|1346
6ORD|1|YA|G|1347
6ORD|1|YA|G|1348
6ORD|1|YA|A|1349
6ORD|1|YA|C|1350
*
6ORD|1|YA|G|1381
6ORD|1|YA|G|1382
6ORD|1|YA|C|1383
6ORD|1|YA|A|1384
6ORD|1|YA|G|1385
*
6ORD|1|YA|C|1402
6ORD|1|YA|C|1403
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y7
- 50S ribosomal protein L34
- Chain YX
- 50S ribosomal protein L23
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