J3_6ORD_069
3D structure
- PDB id
- 6ORD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGG*CUAGA*UGACG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6ORD_069 not in the Motif Atlas
- Homologous match to J3_4LFB_015
- Geometric discrepancy: 0.085
- The information below is about J3_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_17385.4
- Basepair signature
- cWW-F-cWW-cWW-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
6ORD|1|XA|C|586
6ORD|1|XA|G|587
6ORD|1|XA|G|588
*
6ORD|1|XA|C|651
6ORD|1|XA|U|652
6ORD|1|XA|A|653
6ORD|1|XA|G|654
6ORD|1|XA|A|655
*
6ORD|1|XA|U|751
6ORD|1|XA|G|752
6ORD|1|XA|A|753
6ORD|1|XA|C|754
6ORD|1|XA|G|755
Current chains
- Chain XA
- 16S rRNA
Nearby chains
- Chain XH
- 30S ribosomal protein S8
- Chain XL
- 30S ribosomal protein S12
- Chain XO
- 30S ribosomal protein S15
- Chain XQ
- 30S ribosomal protein S17
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