J3_6OSK_018

3D structure

PDB id

6OSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated 70S complex at 60 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6OSK_018 not in the Motif Atlas

Homologous match to J3_4LFB_005

Geometric discrepancy: 0.1828

The information below is about J3_4LFB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_84394.1

Basepair signature

cWW-tWH-F-F-cWW-F-cWW-F

Number of instances in this motif group

2

Unit IDs

6OSK|1|2|C|990
6OSK|1|2|U|991
6OSK|1|2|U|992
6OSK|1|2|G|993
*
6OSK|1|2|C|1045
6OSK|1|2|A|1046
6OSK|1|2|G|1047
*
6OSK|1|2|C|1210
6OSK|1|2|U|1211
6OSK|1|2|U|1212
6OSK|1|2|A|1213
6OSK|1|2|C|1214
6OSK|1|2|G|1215

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain A

Peptide chain release factor 1

Chain s

30S ribosomal protein S14