J3_6OSQ_020
3D structure
- PDB id
- 6OSQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RF1 accommodated state bound Release complex 70S at long incubation time point
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 6OSQ|1|2|A|975, 6OSQ|1|2|G|976, 6OSQ|1|2|A|978
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6OSQ_020 not in the Motif Atlas
- Homologous match to J3_5J7L_006
- Geometric discrepancy: 0.0783
- The information below is about J3_5J7L_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_83516.4
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6OSQ|1|2|U|955
6OSQ|1|2|U|956
6OSQ|1|2|U|957
6OSQ|1|2|A|958
6OSQ|1|2|A|959
6OSQ|1|2|U|960
6OSQ|1|2|U|961
6OSQ|1|2|C|962
*
6OSQ|1|2|G|973
6OSQ|1|2|A|974
6OSQ|1|2|A|975
6OSQ|1|2|G|976
6OSQ|1|2|A|977
6OSQ|1|2|A|978
6OSQ|1|2|C|979
6OSQ|1|2|C|980
6OSQ|1|2|U|981
6OSQ|1|2|U|982
6OSQ|1|2|A|983
6OSQ|1|2|C|984
*
6OSQ|1|2|G|1221
6OSQ|1|2|G|1222
6OSQ|1|2|C|1223
6OSQ|1|2|U|1224
6OSQ|1|2|A|1225
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain A
- Peptide chain release factor 1
- Chain o
- 30S ribosomal protein S10
- Chain r
- 30S ribosomal protein S13
- Chain s
- 30S ribosomal protein S14
- Chain x
- 30S ribosomal protein S19
Coloring options: