J3_6OUO_019

3D structure

PDB id

6OUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 accommodated state bound 70S complex at long incubation time

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUUG*CAG*CUUACG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_6OUO_019 not in the Motif Atlas

Homologous match to J3_4LFB_005

Geometric discrepancy: 0.1838

The information below is about J3_4LFB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_84394.1

Basepair signature

cWW-tWH-F-F-cWW-F-cWW-F

Number of instances in this motif group

2

Unit IDs

6OUO|1|2|C|990
6OUO|1|2|U|991
6OUO|1|2|U|992
6OUO|1|2|G|993
*
6OUO|1|2|C|1045
6OUO|1|2|A|1046
6OUO|1|2|G|1047
*
6OUO|1|2|C|1210
6OUO|1|2|U|1211
6OUO|1|2|U|1212
6OUO|1|2|A|1213
6OUO|1|2|C|1214
6OUO|1|2|G|1215

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain A

Peptide chain release factor 2

Chain s

30S ribosomal protein S14