J3_6P5N_023
3D structure
- PDB id
- 6P5N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AGAUG*CAGU*AGGGUGUAAAU
- Length
- 20 nucleotides
- Bulged bases
- 6P5N|1|5|U|2763
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6P5N|1|5|A|2551
6P5N|1|5|G|2552
6P5N|1|5|A|2553
6P5N|1|5|U|2554
6P5N|1|5|G|2555
*
6P5N|1|5|C|2572
6P5N|1|5|A|2573
6P5N|1|5|G|2574
6P5N|1|5|U|2575
*
6P5N|1|5|A|2757
6P5N|1|5|G|2758
6P5N|1|5|G|2759
6P5N|1|5|G|2760
6P5N|1|5|U|2761
6P5N|1|5|G|2762
6P5N|1|5|U|2763
6P5N|1|5|A|2764
6P5N|1|5|A|2765
6P5N|1|5|A|2766
6P5N|1|5|U|2767
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain AZ
- eL27
Coloring options: