J3_6Q97_049
3D structure
- PDB id
- 6Q97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in A site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGUCAGCU*AGCGCAACC*GAUGACG
- Length
- 24 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q97|1|2|C|1063
6Q97|1|2|G|1064
6Q97|1|2|U|1065
6Q97|1|2|C|1066
6Q97|1|2|A|1067
6Q97|1|2|G|1068
6Q97|1|2|C|1069
6Q97|1|2|U|1070
*
6Q97|1|2|A|1105
6Q97|1|2|G|1106
6Q97|1|2|C|1107
6Q97|1|2|G|1108
6Q97|1|2|C|1109
6Q97|1|2|A|1110
6Q97|1|2|A|1111
6Q97|1|2|C|1112
6Q97|1|2|C|1113
*
6Q97|1|2|G|1187
6Q97|1|2|A|1188
6Q97|1|2|U|1189
6Q97|1|2|G|1190
6Q97|1|2|A|1191
6Q97|1|2|C|1192
6Q97|1|2|G|1193
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain g
- 30S ribosomal protein S2
- Chain h
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S5
- Chain n
- 30S ribosomal protein S9
- Chain o
- 30S ribosomal protein S10
- Chain s
- 30S ribosomal protein S14
Coloring options: