J3_6Q98_004
3D structure
- PDB id
- 6Q98 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of tmRNA SmpB bound in P site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- GGAU*AUUUAAAG*CAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Q98|1|1|G|1055
6Q98|1|1|G|1056
6Q98|1|1|A|1057
6Q98|1|1|U|1058
*
6Q98|1|1|A|1080
6Q98|1|1|U|1081
6Q98|1|1|U|1082
6Q98|1|1|U|1083
6Q98|1|1|A|1084
6Q98|1|1|A|1085
6Q98|1|1|A|1086
6Q98|1|1|G|1087
*
6Q98|1|1|C|1102
6Q98|1|1|A|1103
6Q98|1|1|C|1104
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain H
- 50S ribosomal protein L10
- Chain I
- 50S ribosomal protein L11
- Chain f
- 50S ribosomal protein L36
Coloring options: