J3_6QNR_074
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GCC*GCCUAGUGAACC*GAUCAAC
- Length
- 22 nucleotides
- Bulged bases
- 6QNR|1|1H|A|2401, 6QNR|1|1H|U|2403, 6QNR|1|1H|A|2439
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6QNR_074 not in the Motif Atlas
- Homologous match to J3_9DFE_015
- Geometric discrepancy: 0.1006
- The information below is about J3_9DFE_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_04772.1
- Basepair signature
- cWW-F-tHH-cWW-tHW-tHW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
6QNR|1|1H|G|2295
6QNR|1|1H|C|2296
6QNR|1|1H|C|2297
*
6QNR|1|1H|G|2397
6QNR|1|1H|C|2398
6QNR|1|1H|C|2399
6QNR|1|1H|U|2400
6QNR|1|1H|A|2401
6QNR|1|1H|G|2402
6QNR|1|1H|U|2403
6QNR|1|1H|G|2404
6QNR|1|1H|A|2405
6QNR|1|1H|A|2406
6QNR|1|1H|C|2407
6QNR|1|1H|C|2408
*
6QNR|1|1H|G|2434
6QNR|1|1H|A|2435
6QNR|1|1H|U|2436
6QNR|1|1H|C|2437
6QNR|1|1H|A|2438
6QNR|1|1H|A|2439
6QNR|1|1H|C|2440
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 3K
- Transfer RNA; tRNA
- Chain 78
- 50S ribosomal protein L15
- Chain I8
- 50S ribosomal protein L27
- Chain J8
- 50S ribosomal protein L28
- Chain O8
- 50S ribosomal protein L33
- Chain Q8
- 50S ribosomal protein L35
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