Loop J3_6QNR

3D structure

PDB id: 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
Description: 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å

Loop

Sequence: CGGAUAGCUCAGUCGGUAGAGCAGGG*CCCGUGUCCUUG*CGAGUCCG
Length: 46 nucleotides
Bulged bases: 6QNR|1|3K|U|16, 6QNR|1|3K|C|17, 6QNR|1|3K|G|18, 6QNR|1|3K|C|43, 6QNR|1|3K|U|47
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6QNR|1|3K|C|4
6QNR|1|3K|G|5
6QNR|1|3K|G|6
6QNR|1|3K|A|7
6QNR|1|3K|U|8
6QNR|1|3K|A|9
6QNR|1|3K|G|10
6QNR|1|3K|C|11
6QNR|1|3K|U|12
6QNR|1|3K|C|13
6QNR|1|3K|A|14
6QNR|1|3K|G|15
6QNR|1|3K|U|16
6QNR|1|3K|C|17
6QNR|1|3K|G|18
6QNR|1|3K|G|19
6QNR|1|3K|U|20
6QNR|1|3K|A|21
6QNR|1|3K|G|22
6QNR|1|3K|A|23
6QNR|1|3K|G|24
6QNR|1|3K|C|25
6QNR|1|3K|A|26
6QNR|1|3K|G|27
6QNR|1|3K|G|28
6QNR|1|3K|G|29
*
6QNR|1|3K|C|41
6QNR|1|3K|C|42
6QNR|1|3K|C|43
6QNR|1|3K|G|44
6QNR|1|3K|U|45
6QNR|1|3K|G|46
6QNR|1|3K|U|47
6QNR|1|3K|C|48
6QNR|1|3K|C|49
6QNR|1|3K|U|50
6QNR|1|3K|U|51
6QNR|1|3K|G|52
*
6QNR|1|3K|C|62
6QNR|1|3K|G|63
6QNR|1|3K|A|64
6QNR|1|3K|G|65
6QNR|1|3K|U|66
6QNR|1|3K|C|67
6QNR|1|3K|C|68
6QNR|1|3K|G|69

Current chains

Chain 3K: E. coli tRNAPhe

Nearby chains

Chain 1H: Large subunit ribosomal RNA; LSU rRNA
Chain 2I: 30S ribosomal protein S11
Chain 6E: 30S ribosomal protein S7
Chain 71: 50S ribosomal protein L1
Chain O8: 50S ribosomal protein L33

J3_6QNR_077