J3_6QT0_022

3D structure

PDB id

6QT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GACG*CGCUAAGGAGUG*CUCAC

Length

21 nucleotides

Bulged bases

6QT0|1|A|A|1263

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6QT0|1|A|G|1230
6QT0|1|A|A|1231
6QT0|1|A|C|1232
6QT0|1|A|G|1233
*
6QT0|1|A|C|1255
6QT0|1|A|G|1256
6QT0|1|A|C|1257
6QT0|1|A|U|1258
6QT0|1|A|A|1259
6QT0|1|A|A|1260
6QT0|1|A|G|1261
6QT0|1|A|G|1262
6QT0|1|A|A|1263
6QT0|1|A|G|1264
6QT0|1|A|U|1265
6QT0|1|A|G|1266
*
6QT0|1|A|C|1275
6QT0|1|A|U|1276
6QT0|1|A|C|1277
6QT0|1|A|A|1278
6QT0|1|A|C|1279

Current chains

Chain A

25S rRNA

Nearby chains