J3_6RM3_026
3D structure
- PDB id
- 6RM3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UCGGUG*CAAAA*UA
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6RM3_026 not in the Motif Atlas
- Homologous match to J3_8P9A_055
- Geometric discrepancy: 0.2823
- The information below is about J3_8P9A_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_94309.1
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-cWW-F
- Number of instances in this motif group
- 9
Unit IDs
6RM3|1|L50|U|1185
6RM3|1|L50|C|1186
6RM3|1|L50|G|1187
6RM3|1|L50|G|1188
6RM3|1|L50|U|1189
6RM3|1|L50|G|1190
*
6RM3|1|L50|C|1204
6RM3|1|L50|A|1205
6RM3|1|L50|A|1206
6RM3|1|L50|A|1207
6RM3|1|L50|A|1208
*
6RM3|1|L50|U|1225
6RM3|1|L50|A|1226
Current chains
- Chain L50
- 23S rRNA
Nearby chains
- Chain LGG
- eL34
- Chain LLL
- eL39
- Chain LX0
- uL23
- Chain LXX
- msL1
Coloring options: