J3_6S05_027
3D structure
- PDB id
- 6S05 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GCUC*GAA*UAAAAGC
- Length
- 14 nucleotides
- Bulged bases
- 6S05|1|A|A|2703, 6S05|1|A|A|2705
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6S05|1|A|G|2663
6S05|1|A|C|2664
6S05|1|A|U|2665
6S05|1|A|C|2666
*
6S05|1|A|G|2690
6S05|1|A|A|2691
6S05|1|A|A|2692
*
6S05|1|A|U|2701
6S05|1|A|A|2702
6S05|1|A|A|2703
6S05|1|A|A|2704
6S05|1|A|A|2705
6S05|1|A|G|2706
6S05|1|A|C|2707
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain E
- 60S ribosomal protein L11-A
- Chain P
- 60S ribosomal protein L5
- Chain T
- 60S ribosomal protein L21-A
- Chain x
- 5S ribosomal RNA; 5S rRNA
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