J3_6S12_008

3D structure

PDB id

6S12 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUG*CUAACCC*GGAGACAG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S12|1|A|U|2118
6S12|1|A|U|2119
6S12|1|A|G|2120
*
6S12|1|A|C|2223
6S12|1|A|U|2224
6S12|1|A|A|2225
6S12|1|A|A|2226
6S12|1|A|C|2227
6S12|1|A|C|2228
6S12|1|A|C|2229
*
6S12|1|A|G|2248
6S12|1|A|G|2249
6S12|1|A|A|2250
6S12|1|A|G|2251
6S12|1|A|A|2252
6S12|1|A|C|2253
6S12|1|A|A|2254
6S12|1|A|G|2255

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain V

50S ribosomal protein L28