J3_6S13_012

3D structure

PDB id

6S13 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.58 Å

Loop

Sequence

UCC*GUUAAU*AAUCGA

Length

15 nucleotides

Bulged bases

6S13|1|A|U|2853

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S13|1|A|U|2833
6S13|1|A|C|2834
6S13|1|A|C|2835
*
6S13|1|A|G|2851
6S13|1|A|U|2852
6S13|1|A|U|2853
6S13|1|A|A|2854
6S13|1|A|A|2855
6S13|1|A|U|2856
*
6S13|1|A|A|2902
6S13|1|A|A|2903
6S13|1|A|U|2904
6S13|1|A|C|2905
6S13|1|A|G|2906
6S13|1|A|A|2907

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain L

50S ribosomal protein L17

Chain Z

50S ribosomal protein L32