3D structure

PDB id
6S13 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).
Experimental method
ELECTRON MICROSCOPY
Resolution
3.58 Å

Loop

Sequence
UCUUG*CAG*CUUAUGA
Length
15 nucleotides
Bulged bases
6S13|1|a|U|1224
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6S13|1|a|U|998
6S13|1|a|C|999
6S13|1|a|U|1000
6S13|1|a|U|1001
6S13|1|a|G|1002
*
6S13|1|a|C|1056
6S13|1|a|A|1057
6S13|1|a|G|1058
*
6S13|1|a|C|1220
6S13|1|a|U|1221
6S13|1|a|U|1222
6S13|1|a|A|1223
6S13|1|a|U|1224
6S13|1|a|G|1225
6S13|1|a|A|1226

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain n
30S ribosomal protein S14 type Z

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.086 s