J3_6S13_033
3D structure
- PDB id
- 6S13 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.58 Å
Loop
- Sequence
- GCACAAG*CUAGUAAU*GUGAAUACGUUCCC
- Length
- 29 nucleotides
- Bulged bases
- 6S13|1|a|U|1382, 6S13|1|a|U|1391, 6S13|1|a|C|1392
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6S13|1|a|G|942
6S13|1|a|C|943
6S13|1|a|A|944
6S13|1|a|C|945
6S13|1|a|A|946
6S13|1|a|A|947
6S13|1|a|G|948
*
6S13|1|a|C|1354
6S13|1|a|U|1355
6S13|1|a|A|1356
6S13|1|a|G|1357
6S13|1|a|U|1358
6S13|1|a|A|1359
6S13|1|a|A|1360
6S13|1|a|U|1361
*
6S13|1|a|G|1381
6S13|1|a|U|1382
6S13|1|a|G|1383
6S13|1|a|A|1384
6S13|1|a|A|1385
6S13|1|a|U|1386
6S13|1|a|A|1387
6S13|1|a|C|1388
6S13|1|a|G|1389
6S13|1|a|U|1390
6S13|1|a|U|1391
6S13|1|a|C|1392
6S13|1|a|C|1393
6S13|1|a|C|1394
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
- Chain v
- Ribosome hibernation promoting factor
Coloring options: