J3_6S13_034

3D structure

PDB id

6S13 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.58 Å

Loop

Sequence

UCUUGACAUCC*GUGACAG*CUUAUGA

Length

25 nucleotides

Bulged bases

6S13|1|a|U|1224

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S13|1|a|U|998
6S13|1|a|C|999
6S13|1|a|U|1000
6S13|1|a|U|1001
6S13|1|a|G|1002
6S13|1|a|A|1003
6S13|1|a|C|1004
6S13|1|a|A|1005
6S13|1|a|U|1006
6S13|1|a|C|1007
6S13|1|a|C|1008
*
6S13|1|a|G|1052
6S13|1|a|U|1053
6S13|1|a|G|1054
6S13|1|a|A|1055
6S13|1|a|C|1056
6S13|1|a|A|1057
6S13|1|a|G|1058
*
6S13|1|a|C|1220
6S13|1|a|U|1221
6S13|1|a|U|1222
6S13|1|a|A|1223
6S13|1|a|U|1224
6S13|1|a|G|1225
6S13|1|a|A|1226

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14 type Z