J3_6S13_037

3D structure

PDB id

6S13 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).

Experimental method

ELECTRON MICROSCOPY

Resolution

3.58 Å

Loop

Sequence

GUGUC*GAUGUUG*CGCAAC

Length

18 nucleotides

Bulged bases

6S13|1|a|G|1095, 6S13|1|a|U|1096, 6S13|1|a|A|1112

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6S13|1|a|G|1083
6S13|1|a|U|1084
6S13|1|a|G|1085
6S13|1|a|U|1086
6S13|1|a|C|1087
*
6S13|1|a|G|1092
6S13|1|a|A|1093
6S13|1|a|U|1094
6S13|1|a|G|1095
6S13|1|a|U|1096
6S13|1|a|U|1097
6S13|1|a|G|1098
*
6S13|1|a|C|1109
6S13|1|a|G|1110
6S13|1|a|C|1111
6S13|1|a|A|1112
6S13|1|a|A|1113
6S13|1|a|C|1114

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain b

30S ribosomal protein S2

Chain c

30S ribosomal protein S3

Chain e

30S ribosomal protein S5