J3_6SGC_031
3D structure
- PDB id
- 6SGC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome stalled on a poly(A) tail
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CUGGC*GGACAAG*CCCGAGAUUG
- Length
- 22 nucleotides
- Bulged bases
- 6SGC|1|A1|U|1477
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SGC|1|A1|C|1391
6SGC|1|A1|U|1392
6SGC|1|A1|G|1393
6SGC|1|A1|G|1394
6SGC|1|A1|C|1395
*
6SGC|1|A1|G|1450
6SGC|1|A1|G|1451
6SGC|1|A1|A|1452
6SGC|1|A1|C|1453
6SGC|1|A1|A|1454
6SGC|1|A1|A|1455
6SGC|1|A1|G|1456
*
6SGC|1|A1|C|1470
6SGC|1|A1|C|1471
6SGC|1|A1|C|1472
6SGC|1|A1|G|1473
6SGC|1|A1|A|1474
6SGC|1|A1|G|1475
6SGC|1|A1|A|1476
6SGC|1|A1|U|1477
6SGC|1|A1|U|1478
6SGC|1|A1|G|1479
Current chains
- Chain A1
- 18S ribosomal RNA
Nearby chains
- Chain E1
- uS5
- Chain G1
- Ribosomal protein S5
- Chain R1
- Ribosomal protein S16
- Chain S1
- eS17
- Chain V1
- Ribosomal_S10 domain-containing protein
- Chain e1
- uS14
- Chain h1
- WD_REPEATS_REGION domain-containing protein
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