J3_6SGC_043
3D structure
- PDB id
- 6SGC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome stalled on a poly(A) tail
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- UGGA*UUAAGAG*CAUUA
- Length
- 16 nucleotides
- Bulged bases
- 6SGC|1|A1|G|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SGC|1|A1|U|682
6SGC|1|A1|G|683
6SGC|1|A1|G|684
6SGC|1|A1|A|685
*
6SGC|1|A1|U|917
6SGC|1|A1|U|918
6SGC|1|A1|A|919
6SGC|1|A1|A|920
6SGC|1|A1|G|921
6SGC|1|A1|A|922
6SGC|1|A1|G|923
*
6SGC|1|A1|C|1019
6SGC|1|A1|A|1020
6SGC|1|A1|U|1021
6SGC|1|A1|U|1022
6SGC|1|A1|A|1023
Current chains
- Chain A1
- 18S ribosomal RNA
Nearby chains
- Chain I1
- 40S ribosomal protein S7
- Chain M1
- Ribosomal protein S11
- Chain O1
- Ribosomal_S13_N domain-containing protein
- Chain X1
- Ribosomal protein S15a
- Chain Y1
- uS12
- Chain c1
- 40S ribosomal protein S27
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