J3_6SJ6_007

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

UC*GGUUAGUC*GUA

Length

13 nucleotides

Bulged bases

6SJ6|1|A|U|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|U|1350
6SJ6|1|A|C|1351
*
6SJ6|1|A|G|1375
6SJ6|1|A|G|1376
6SJ6|1|A|U|1377
6SJ6|1|A|U|1378
6SJ6|1|A|A|1379
6SJ6|1|A|G|1380
6SJ6|1|A|U|1381
6SJ6|1|A|C|1382
*
6SJ6|1|A|G|1645
6SJ6|1|A|U|1646
6SJ6|1|A|A|1647

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 6

50S ribosomal protein L34

Chain W

50S ribosomal protein L23