J3_6SJ6_008

3D structure

PDB id

6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CUGCC*GGCGAAGGUAG*CGAAAG

Length

22 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SJ6|1|A|C|1860
6SJ6|1|A|U|1861
6SJ6|1|A|G|1862
6SJ6|1|A|C|1863
6SJ6|1|A|C|1864
*
6SJ6|1|A|G|1930
6SJ6|1|A|G|1931
6SJ6|1|A|C|1932
6SJ6|1|A|G|1933
6SJ6|1|A|A|1954
6SJ6|1|A|A|1955
6SJ6|1|A|G|1956
6SJ6|1|A|G|1957
6SJ6|1|A|U|1958
6SJ6|1|A|A|1959
6SJ6|1|A|G|1960
*
6SJ6|1|A|C|1994
6SJ6|1|A|G|1995
6SJ6|1|A|A|1996
6SJ6|1|A|A|1997
6SJ6|1|A|A|1998
6SJ6|1|A|G|1999

Current chains

Chain A

23S ribosomal RNA

Nearby chains