J3_6SKF_004
3D structure
- PDB id
- 6SKF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of T. kodakarensis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.95 Å
Loop
- Sequence
- CUAG*CGGAGG*C(4AC)GUUAAG
- Length
- 18 nucleotides
- Bulged bases
- 6SKF|1|Aa|U|821
- QA status
- Modified nucleotides: 4AC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SKF|1|Aa|C|772
6SKF|1|Aa|U|773
6SKF|1|Aa|A|774
6SKF|1|Aa|G|775
*
6SKF|1|Aa|C|807
6SKF|1|Aa|G|808
6SKF|1|Aa|G|809
6SKF|1|Aa|A|810
6SKF|1|Aa|G|811
6SKF|1|Aa|G|812
*
6SKF|1|Aa|C|817
6SKF|1|Aa|4AC|818
6SKF|1|Aa|G|819
6SKF|1|Aa|U|820
6SKF|1|Aa|U|821
6SKF|1|Aa|A|822
6SKF|1|Aa|A|823
6SKF|1|Aa|G|824
Current chains
- Chain Aa
- 16S rRNA
Nearby chains
- Chain Ab
- 30S ribosomal protein S2
- Chain Ag
- 30S ribosomal protein S5
- Chain Aj
- 30S ribosomal protein S8
- Chain Ao
- 30S ribosomal protein S12
- Chain Aq
- 30S ribosomal protein S15
- Chain Ax
- 30S ribosomal protein S27e
- Chain Az
- Predicted zinc-ribbon RNA-binding protein involved in translation
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