J3_6SKF_031
3D structure
- PDB id
- 6SKF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of T. kodakarensis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.95 Å
Loop
- Sequence
- (4AC)GUCAG*(B8T)GAGAC*G(B8T)GACG
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 4AC, B8T
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SKF|1|Aa|4AC|1007
6SKF|1|Aa|G|1008
6SKF|1|Aa|U|1009
6SKF|1|Aa|C|1010
6SKF|1|Aa|A|1011
6SKF|1|Aa|G|1012
*
6SKF|1|Aa|B8T|1051
6SKF|1|Aa|G|1052
6SKF|1|Aa|A|1053
6SKF|1|Aa|G|1054
6SKF|1|Aa|A|1055
6SKF|1|Aa|C|1056
*
6SKF|1|Aa|G|1140
6SKF|1|Aa|B8T|1141
6SKF|1|Aa|G|1142
6SKF|1|Aa|A|1143
6SKF|1|Aa|C|1144
6SKF|1|Aa|G|1145
Current chains
- Chain Aa
- 16S rRNA
Nearby chains
- Chain Ac
- 30S ribosomal protein S3
- Chain Ag
- 30S ribosomal protein S5
- Chain Al
- 30S ribosomal protein S9
- Chain Am
- 30S ribosomal protein S10
- Chain Ar
- 30S ribosomal protein S14 type Z
- Chain At
- 30S ribosomal protein S17e
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