J3_6SPF_008
3D structure
- PDB id
- 6SPF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- GCUC*GAG*CAAAAGC
- Length
- 14 nucleotides
- Bulged bases
- 6SPF|1|A|A|2321
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6SPF|1|A|G|2281
6SPF|1|A|C|2282
6SPF|1|A|U|2283
6SPF|1|A|C|2284
*
6SPF|1|A|G|2308
6SPF|1|A|A|2309
6SPF|1|A|G|2310
*
6SPF|1|A|C|2319
6SPF|1|A|A|2320
6SPF|1|A|A|2321
6SPF|1|A|A|2322
6SPF|1|A|A|2323
6SPF|1|A|G|2324
6SPF|1|A|C|2325
Current chains
- Chain A
- Pseudomonas aeruginosa strain PAO1 23S ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain F
- 50S ribosomal protein L5
- Chain O
- 50S ribosomal protein L18
- Chain W
- 50S ribosomal protein L27
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