J3_6SPG_038

3D structure

PDB id

6SPG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70s ribosome from a clinical isolate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.34 Å

Loop

Sequence

GAAC*GGUGCC*GGAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6SPG|1|a|G|997
6SPG|1|a|A|998
6SPG|1|a|A|999
6SPG|1|a|C|1000
*
6SPG|1|a|G|1017
6SPG|1|a|G|1018
6SPG|1|a|U|1019
6SPG|1|a|G|1020
6SPG|1|a|C|1021
6SPG|1|a|C|1022
*
6SPG|1|a|G|1027
6SPG|1|a|G|1028
6SPG|1|a|A|1029
6SPG|1|a|A|1030
6SPG|1|a|C|1031

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14