J3_6T59_015

3D structure

PDB id

6T59 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CAU*GCUUCUG*CAAGG

Length

15 nucleotides

Bulged bases

6T59|1|54|U|4989

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T59|1|54|C|4970
6T59|1|54|A|4971
6T59|1|54|U|4972
*
6T59|1|54|G|4986
6T59|1|54|C|4987
6T59|1|54|U|4988
6T59|1|54|U|4989
6T59|1|54|C|4990
6T59|1|54|U|4991
6T59|1|54|G|4992
*
6T59|1|54|C|5059
6T59|1|54|A|5060
6T59|1|54|A|5061
6T59|1|54|G|5062
6T59|1|54|G|5063

Current chains

Chain 54

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain P3

uL22

Chain d3

eL31