J3_6T59_024
3D structure
- PDB id
- 6T59 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- GGGGGCGAGC*GGCUCUCGCUUCUGGCGCCAAG*CGAC
- Length
- 36 nucleotides
- Bulged bases
- 6T59|1|54|C|4116, 6T59|1|54|U|4117, 6T59|1|54|U|4118, 6T59|1|54|C|4119, 6T59|1|54|U|4120, 6T59|1|54|G|4121
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6T59|1|54|G|4091
6T59|1|54|G|4092
6T59|1|54|G|4093
6T59|1|54|G|4094
6T59|1|54|G|4095
6T59|1|54|C|4096
6T59|1|54|G|4097
6T59|1|54|A|4098
6T59|1|54|G|4099
6T59|1|54|C|4100
*
6T59|1|54|G|4108
6T59|1|54|G|4109
6T59|1|54|C|4110
6T59|1|54|U|4111
6T59|1|54|C|4112
6T59|1|54|U|4113
6T59|1|54|C|4114
6T59|1|54|G|4115
6T59|1|54|C|4116
6T59|1|54|U|4117
6T59|1|54|U|4118
6T59|1|54|C|4119
6T59|1|54|U|4120
6T59|1|54|G|4121
6T59|1|54|G|4122
6T59|1|54|C|4123
6T59|1|54|G|4124
6T59|1|54|C|4125
6T59|1|54|C|4126
6T59|1|54|A|4127
6T59|1|54|A|4128
6T59|1|54|G|4129
*
6T59|1|54|C|4155
6T59|1|54|G|4156
6T59|1|54|A|4157
6T59|1|54|C|4158
Current chains
- Chain 54
- 28S ribosomal RNA
Nearby chains
- Chain A3
- Ribosomal protein L8
- Chain G3
- eL8
- Chain X3
- uL23
- Chain Z3
- 60S ribosomal protein L27
- Chain c3
- eL30
- Chain g3
- eL34
- Chain p3
- eL43
Coloring options: