J3_6T59_026

3D structure

PDB id

6T59 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CUAUC*GUU*ACUAAUAG

Length

16 nucleotides

Bulged bases

6T59|1|54|A|4464, 6T59|1|54|U|4465

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T59|1|54|C|4462
6T59|1|54|U|4463
6T59|1|54|A|4464
6T59|1|54|U|4465
6T59|1|54|C|4466
*
6T59|1|54|G|4491
6T59|1|54|U|4492
6T59|1|54|U|4493
*
6T59|1|54|A|4507
6T59|1|54|C|4508
6T59|1|54|U|4509
6T59|1|54|A|4510
6T59|1|54|A|4511
6T59|1|54|U|4512
6T59|1|54|A|4513
6T59|1|54|G|4514

Current chains

Chain 54

28S ribosomal RNA

Nearby chains

Chain B3

uL3

Chain O3

uL13

Chain V3

Ribosomal protein L23