J3_6T83_015
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CUC*GAA*UAAAAG
- Length
- 12 nucleotides
- Bulged bases
- 6T83|1|1b|A|2703
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6T83_015 not in the Motif Atlas
- Homologous match to J3_8C3A_010
- Geometric discrepancy: 0.1285
- The information below is about J3_8C3A_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_91491.5
- Basepair signature
- cWW-F-tWW-tHW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
6T83|1|1b|C|2664
6T83|1|1b|U|2665
6T83|1|1b|C|2666
*
6T83|1|1b|G|2690
6T83|1|1b|A|2691
6T83|1|1b|A|2692
*
6T83|1|1b|U|2701
6T83|1|1b|A|2702
6T83|1|1b|A|2703
6T83|1|1b|A|2704
6T83|1|1b|A|2705
6T83|1|1b|G|2706
Current chains
- Chain 1b
- 25S rRNA
Nearby chains
- Chain 4b
- 5S ribosomal RNA; 5S rRNA
- Chain 6b
- Transfer RNA; tRNA
- Chain Dy
- 60S ribosomal protein L5
- Chain Jy
- 60S ribosomal protein L11-A
- Chain Ty
- 60S ribosomal protein L21-A
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