J3_6T83_027
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UCUUAG*CGAGAC*GCAAUA
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6T83_027 not in the Motif Atlas
- Homologous match to J3_8P9A_080
- Geometric discrepancy: 0.3509
- The information below is about J3_8P9A_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_99563.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-cWW-cWW-F-F-F-F
- Number of instances in this motif group
- 1
Unit IDs
6T83|1|2b|U|1283
6T83|1|2b|C|1284
6T83|1|2b|U|1285
6T83|1|2b|U|1286
6T83|1|2b|A|1287
6T83|1|2b|G|1288
*
6T83|1|2b|C|1327
6T83|1|2b|G|1328
6T83|1|2b|A|1329
6T83|1|2b|G|1330
6T83|1|2b|A|1331
6T83|1|2b|C|1332
*
6T83|1|2b|G|1419
6T83|1|2b|C|1420
6T83|1|2b|A|1421
6T83|1|2b|A|1422
6T83|1|2b|U|1423
6T83|1|2b|A|1424
Current chains
- Chain 2b
- 18S rRNA
Nearby chains
- Chain Cb
- 40S ribosomal protein S2
- Chain Db
- 40S ribosomal protein S3
- Chain Qb
- 40S ribosomal protein S16-A
- Chain Rb
- 40S ribosomal protein S17-B
- Chain Ub
- 40S ribosomal protein S20
- Chain db
- 40S ribosomal protein S29-A
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