J3_6TNN_017
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- UGAAG*CGCCAUAGGA*UGUAG
- Length
- 20 nucleotides
- Bulged bases
- 6TNN|1|U|U|363
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6TNN_017 not in the Motif Atlas
- Homologous match to J3_4WF9_015
- Geometric discrepancy: 0.118
- The information below is about J3_4WF9_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_77124.1
- Basepair signature
- cWW-tSH-cHH-cSW-F-tHS-cWW-cWW-F-F-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6TNN|1|U|U|338
6TNN|1|U|G|339
6TNN|1|U|A|340
6TNN|1|U|A|341
6TNN|1|U|G|342
*
6TNN|1|U|C|358
6TNN|1|U|G|359
6TNN|1|U|C|360
6TNN|1|U|C|361
6TNN|1|U|A|362
6TNN|1|U|U|363
6TNN|1|U|A|364
6TNN|1|U|G|365
6TNN|1|U|G|366
6TNN|1|U|A|367
*
6TNN|1|U|U|379
6TNN|1|U|G|380
6TNN|1|U|U|381
6TNN|1|U|A|382
6TNN|1|U|G|383
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain Y
- 50S ribosomal protein L4
- Chain n
- 50S ribosomal protein L24
Coloring options: