J3_6TNN_018
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- UCGGGAC*GACAA*UA
- Length
- 14 nucleotides
- Bulged bases
- 6TNN|1|U|A|1421
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6TNN_018 not in the Motif Atlas
- Homologous match to J3_4WF9_016
- Geometric discrepancy: 0.1916
- The information below is about J3_4WF9_016
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_94309.1
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-cWW-F
- Number of instances in this motif group
- 9
Unit IDs
6TNN|1|U|U|1381
6TNN|1|U|C|1382
6TNN|1|U|G|1383
6TNN|1|U|G|1384
6TNN|1|U|G|1385
6TNN|1|U|A|1386
6TNN|1|U|C|1387
*
6TNN|1|U|G|1418
6TNN|1|U|A|1419
6TNN|1|U|C|1420
6TNN|1|U|A|1421
6TNN|1|U|A|1422
*
6TNN|1|U|U|1439
6TNN|1|U|A|1440
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain m
- 50S ribosomal protein L23
Coloring options: