J3_6U48_021
3D structure
- PDB id
- 6U48 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S with phazolicin (PHZ) bound in exit tunnel
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- GCCGUAGC*GCGC*GGAAC
- Length
- 17 nucleotides
- Bulged bases
- 6U48|1|CB|U|14, 6U48|1|CB|A|108
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6U48|1|CB|G|10
6U48|1|CB|C|11
6U48|1|CB|C|12
6U48|1|CB|G|13
6U48|1|CB|U|14
6U48|1|CB|A|15
6U48|1|CB|G|16
6U48|1|CB|C|17
*
6U48|1|CB|G|67
6U48|1|CB|C|68
6U48|1|CB|G|69
6U48|1|CB|C|70
*
6U48|1|CB|G|106
6U48|1|CB|G|107
6U48|1|CB|A|108
6U48|1|CB|A|109
6U48|1|CB|C|110
Current chains
- Chain CB
- 5S rRNA
Nearby chains
- Chain CA
- Large subunit ribosomal RNA; LSU rRNA
- Chain CP
- 50S ribosomal protein uL18
- Chain CW
- 50S ribosomal protein bL25
- Chain CX
- 50S ribosomal protein bL27
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