J3_6UZ7_011
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAAAUUUGAAA*UAAUUUGAAG*CGACG
- Length
- 26 nucleotides
- Bulged bases
- 6UZ7|1|5|U|117, 6UZ7|1|5|A|156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6UZ7_011 not in the Motif Atlas
- Homologous match to J3_8C3A_001
- Geometric discrepancy: 0.1326
- The information below is about J3_8C3A_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_88489.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-tWH-F-F-tHS-cWW-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
6UZ7|1|5|C|113
6UZ7|1|5|A|114
6UZ7|1|5|A|115
6UZ7|1|5|A|116
6UZ7|1|5|U|117
6UZ7|1|5|U|118
6UZ7|1|5|U|119
6UZ7|1|5|G|120
6UZ7|1|5|A|121
6UZ7|1|5|A|122
6UZ7|1|5|A|123
*
6UZ7|1|5|U|149
6UZ7|1|5|A|150
6UZ7|1|5|A|151
6UZ7|1|5|U|152
6UZ7|1|5|U|153
6UZ7|1|5|U|154
6UZ7|1|5|G|155
6UZ7|1|5|A|156
6UZ7|1|5|A|157
6UZ7|1|5|G|158
*
6UZ7|1|5|C|263
6UZ7|1|5|G|264
6UZ7|1|5|A|265
6UZ7|1|5|C|266
6UZ7|1|5|G|267
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AG
- KLLA0E00573p
- Chain AL
- 60S ribosomal protein L13
- Chain AN
- Ribosomal protein L15
- Chain Bh
- KLLA0F05247p
- Chain Bi
- 60S ribosomal protein L36
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