J3_6UZ7_015
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UAG*CGUAG*UCGA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6UZ7_015 not in the Motif Atlas
- Homologous match to J3_8C3A_004
- Geometric discrepancy: 0.1218
- The information below is about J3_8C3A_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44724.5
- Basepair signature
- cWW-tSH-F-cWW-tHS-cWW-F
- Number of instances in this motif group
- 6
Unit IDs
6UZ7|1|5|U|800
6UZ7|1|5|A|801
6UZ7|1|5|G|802
*
6UZ7|1|5|C|834
6UZ7|1|5|G|835
6UZ7|1|5|U|836
6UZ7|1|5|A|837
6UZ7|1|5|G|838
*
6UZ7|1|5|U|863
6UZ7|1|5|C|864
6UZ7|1|5|G|865
6UZ7|1|5|A|866
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AA
- KLLA0D16027p
- Chain AR
- KLLA0E12453p
- Chain Bg
- KLLA0C08371p
Coloring options: