J3_6UZ7_021
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AUUG*CUUAUU*AAGACAUU
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6UZ7_021 not in the Motif Atlas
- Homologous match to J3_8C3A_008
- Geometric discrepancy: 0.1276
- The information below is about J3_8C3A_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_18654.1
- Basepair signature
- cWW-F-F-tSH-tHW-F-F-F-cWW-F-cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
6UZ7|1|5|A|2401
6UZ7|1|5|U|2402
6UZ7|1|5|U|2403
6UZ7|1|5|G|2404
*
6UZ7|1|5|C|2481
6UZ7|1|5|U|2482
6UZ7|1|5|U|2483
6UZ7|1|5|A|2484
6UZ7|1|5|U|2485
6UZ7|1|5|U|2486
*
6UZ7|1|5|A|2558
6UZ7|1|5|A|2559
6UZ7|1|5|G|2560
6UZ7|1|5|A|2561
6UZ7|1|5|C|2562
6UZ7|1|5|A|2563
6UZ7|1|5|U|2564
6UZ7|1|5|U|2565
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AA
- KLLA0D16027p
- Chain AG
- KLLA0E00573p
- Chain AN
- Ribosomal protein L15
- Chain B
- 40S ribosomal protein S1
- Chain Bi
- 60S ribosomal protein L36
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