#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8break 9 10 11 12break 13 14 15 16 171-172-163-154-147-108-912-13
1 J3_5TBW_0125TBW0.000011 LSU rRNAA2590A2591G2592A2593C2594A2595U2596U2597*A2432U2433U2434G2435*C2512U2513A2515U2516U2517cWWntSHtSHtHWncWwcWWcWW
2 J3_8C3A_0088C3A0.075111 LSU rRNAA2562A2563G2564A2565C2566A2567U2568U2569*A2410U2411U2412G2413*C2490U2491A2493U2494U2495cWWntSHtSHtHWncWwcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
AUUG*CUUAUU*AAGACAUU2
Non-Watson-Crick part of the motif
SequenceCounts
UU*UUAU*AGACAU2

Release history

Release3.803.813.823.833.843.853.863.873.883.89
Date2024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-09
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-F-F-tSH-tHW-F-F-F-cWW-F-cWW-F-F
    Heat map statistics
    Min 0.08 | Avg 0.04 | Max 0.08
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