J3_6UZ7_022
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUC*GAA*UAAAAG
- Length
- 12 nucleotides
- Bulged bases
- 6UZ7|1|5|A|2671
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6UZ7_022 not in the Motif Atlas
- Homologous match to J3_8C3A_010
- Geometric discrepancy: 0.1177
- The information below is about J3_8C3A_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_91491.5
- Basepair signature
- cWW-F-tWW-tHW-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
6UZ7|1|5|C|2632
6UZ7|1|5|U|2633
6UZ7|1|5|C|2634
*
6UZ7|1|5|G|2658
6UZ7|1|5|A|2659
6UZ7|1|5|A|2660
*
6UZ7|1|5|U|2669
6UZ7|1|5|A|2670
6UZ7|1|5|A|2671
6UZ7|1|5|A|2672
6UZ7|1|5|A|2673
6UZ7|1|5|G|2674
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain AD
- KLLA0D06941p
- Chain AJ
- KLLA0F08261p
- Chain AT
- KLLA0E23651p
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