J3_6UZ7_038
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UU*AGAAG*CAUUUGA
- Length
- 14 nucleotides
- Bulged bases
- 6UZ7|1|5|A|1036
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6UZ7_038 not in the Motif Atlas
- Homologous match to J3_8P9A_051
- Geometric discrepancy: 0.567
- The information below is about J3_8P9A_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_84137.2
- Basepair signature
- cWW-cWW-cHW-F-cSS-F-cWW
- Number of instances in this motif group
- 5
Unit IDs
6UZ7|1|5|U|957
6UZ7|1|5|U|958
*
6UZ7|1|5|A|1033
6UZ7|1|5|G|1034
6UZ7|1|5|A|1035
6UZ7|1|5|A|1036
6UZ7|1|5|G|1037
*
6UZ7|1|5|C|1063
6UZ7|1|5|A|1064
6UZ7|1|5|U|1065
6UZ7|1|5|U|1066
6UZ7|1|5|U|1067
6UZ7|1|5|G|1068
6UZ7|1|5|A|1069
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AF
- KLLA0D03410p
- Chain AT
- KLLA0E23651p
- Chain Bb
- 60S ribosomal protein L29
Coloring options: