J3_6UZ7_041
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGACG*CC*GAAAAU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6UZ7_041 not in the Motif Atlas
- Homologous match to J3_8P9A_058
- Geometric discrepancy: 0.1058
- The information below is about J3_8P9A_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_08594.2
- Basepair signature
- cWW-tSH-tHH-F-F-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
6UZ7|1|5|A|1623
6UZ7|1|5|G|1624
6UZ7|1|5|A|1625
6UZ7|1|5|C|1626
6UZ7|1|5|G|1627
*
6UZ7|1|5|C|1760
6UZ7|1|5|C|1761
*
6UZ7|1|5|G|1765
6UZ7|1|5|A|1766
6UZ7|1|5|A|1767
6UZ7|1|5|A|1768
6UZ7|1|5|A|1769
6UZ7|1|5|U|1770
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AA
- KLLA0D16027p
- Chain Bg
- KLLA0C08371p
- Chain Bp
- KLLA0E05941p
Coloring options: