J3_6UZ7_042
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUC*GCCUAUCGAUCC*GGUGCC
- Length
- 21 nucleotides
- Bulged bases
- 6UZ7|1|5|C|2728, 6UZ7|1|5|C|2765
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6UZ7_042 not in the Motif Atlas
- Homologous match to J3_8P9A_061
- Geometric discrepancy: 0.1088
- The information below is about J3_8P9A_061
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_04772.2
- Basepair signature
- cWW-F-tHH-cWW-tHW-tHW-F-cWW-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
6UZ7|1|5|G|2619
6UZ7|1|5|U|2620
6UZ7|1|5|C|2621
*
6UZ7|1|5|G|2722
6UZ7|1|5|C|2723
6UZ7|1|5|C|2724
6UZ7|1|5|U|2725
6UZ7|1|5|A|2726
6UZ7|1|5|U|2727
6UZ7|1|5|C|2728
6UZ7|1|5|G|2729
6UZ7|1|5|A|2730
6UZ7|1|5|U|2731
6UZ7|1|5|C|2732
6UZ7|1|5|C|2733
*
6UZ7|1|5|G|2761
6UZ7|1|5|G|2762
6UZ7|1|5|U|2763
6UZ7|1|5|G|2764
6UZ7|1|5|C|2765
6UZ7|1|5|C|2766
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain AQ
- KLLA0A07227p
- Chain AT
- KLLA0E23651p
- Chain Ba
- RPL28
- Chain Bo
- 60S ribosomal protein L44
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