J3_6V3E_003
3D structure
- PDB id
- 6V3E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 30S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.4 Å
Loop
- Sequence
- UA*UACCGAUGG*CAG
- Length
- 14 nucleotides
- Bulged bases
- 6V3E|1|sN1|U|720
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6V3E_003 not in the Motif Atlas
- Homologous match to J3_5J7L_003
- Geometric discrepancy: 0.1789
- The information below is about J3_5J7L_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_11934.4
- Basepair signature
- cWW-cWW-tWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6V3E|1|sN1|U|669
6V3E|1|sN1|A|670
*
6V3E|1|sN1|U|714
6V3E|1|sN1|A|715
6V3E|1|sN1|C|716
6V3E|1|sN1|C|717
6V3E|1|sN1|G|718
6V3E|1|sN1|A|719
6V3E|1|sN1|U|720
6V3E|1|sN1|G|721
6V3E|1|sN1|G|722
*
6V3E|1|sN1|C|729
6V3E|1|sN1|A|730
6V3E|1|sN1|G|731
Current chains
- Chain sN1
- 16s Ribosomal RNA
Nearby chains
- Chain f
- 30S ribosomal protein S6
- Chain k
- 30S ribosomal protein S11
- Chain o
- 30S ribosomal protein S15
- Chain r
- 30S ribosomal protein S18
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