J3_6W6L_005

3D structure

PDB id

6W6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human ribosome-TMCO1 translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.84 Å

Loop

Sequence

GCGCAGUCC*GUGCG*CGACGUC

Length

21 nucleotides

Bulged bases

6W6L|1|t|U|448

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W6L|1|t|G|442
6W6L|1|t|C|443
6W6L|1|t|G|444
6W6L|1|t|C|445
6W6L|1|t|A|446
6W6L|1|t|G|447
6W6L|1|t|U|448
6W6L|1|t|C|449
6W6L|1|t|C|450
*
6W6L|1|t|G|692
6W6L|1|t|U|693
6W6L|1|t|G|694
6W6L|1|t|C|695
6W6L|1|t|G|696
*
6W6L|1|t|C|1275
6W6L|1|t|G|1276
6W6L|1|t|A|1277
6W6L|1|t|C|1278
6W6L|1|t|G|1279
6W6L|1|t|U|1280
6W6L|1|t|C|1281

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain 7

Coiled-coil domain-containing protein 47

Chain G

60S ribosomal protein L6

Chain f

60S ribosomal protein L32

Chain g

60S ribosomal protein L35a