J3_6W6L_012

3D structure

PDB id

6W6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human ribosome-TMCO1 translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.84 Å

Loop

Sequence

AGAUG*CAGU*AGGGUGUAAAU

Length

20 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W6L|1|t|A|2530
6W6L|1|t|G|2531
6W6L|1|t|A|2532
6W6L|1|t|U|2533
6W6L|1|t|G|2534
*
6W6L|1|t|C|2551
6W6L|1|t|A|2552
6W6L|1|t|G|2553
6W6L|1|t|U|2554
*
6W6L|1|t|A|2736
6W6L|1|t|G|2737
6W6L|1|t|G|2738
6W6L|1|t|G|2739
6W6L|1|t|U|2740
6W6L|1|t|G|2741
6W6L|1|t|U|2742
6W6L|1|t|A|2743
6W6L|1|t|A|2744
6W6L|1|t|A|2745
6W6L|1|t|U|2746

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain a

60S ribosomal protein L27