J3_6W6L_022
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- GGGCCCAAGUCC*GAGGCCCAGCC*GGACGGUGUGAGGCCGGUAGCGGC
- Length
- 47 nucleotides
- Bulged bases
- 6W6L|1|t|C|212, 6W6L|1|t|C|213, 6W6L|1|t|U|228, 6W6L|1|t|G|241
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6W6L|1|t|G|188
6W6L|1|t|G|189
6W6L|1|t|G|190
6W6L|1|t|C|191
6W6L|1|t|C|192
6W6L|1|t|C|193
6W6L|1|t|A|194
6W6L|1|t|A|195
6W6L|1|t|G|196
6W6L|1|t|U|197
6W6L|1|t|C|198
6W6L|1|t|C|199
*
6W6L|1|t|G|208
6W6L|1|t|A|209
6W6L|1|t|G|210
6W6L|1|t|G|211
6W6L|1|t|C|212
6W6L|1|t|C|213
6W6L|1|t|C|214
6W6L|1|t|A|215
6W6L|1|t|G|216
6W6L|1|t|C|217
6W6L|1|t|C|218
*
6W6L|1|t|G|222
6W6L|1|t|G|223
6W6L|1|t|A|224
6W6L|1|t|C|225
6W6L|1|t|G|226
6W6L|1|t|G|227
6W6L|1|t|U|228
6W6L|1|t|G|229
6W6L|1|t|U|230
6W6L|1|t|G|231
6W6L|1|t|A|232
6W6L|1|t|G|233
6W6L|1|t|G|234
6W6L|1|t|C|235
6W6L|1|t|C|236
6W6L|1|t|G|237
6W6L|1|t|G|238
6W6L|1|t|U|239
6W6L|1|t|A|240
6W6L|1|t|G|241
6W6L|1|t|C|242
6W6L|1|t|G|243
6W6L|1|t|G|244
6W6L|1|t|C|245
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain 6
- Calcium load-activated calcium channel
- Chain C
- 60S ribosomal protein L4
- Chain D
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain Z
- 60S ribosomal protein L26
- Chain f
- 60S ribosomal protein L32
- Chain k
- 60S ribosomal protein L37
Coloring options: