J3_6W6L_028
3D structure
- PDB id
- 6W6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human ribosome-TMCO1 translocon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.84 Å
Loop
- Sequence
- UCGGUUG*CCUUC*GCACCGCACGUUCGUG
- Length
- 28 nucleotides
- Bulged bases
- 6W6L|1|t|U|4839, 6W6L|1|t|U|4840, 6W6L|1|t|A|4896, 6W6L|1|t|C|4898, 6W6L|1|t|A|4901, 6W6L|1|t|C|4902, 6W6L|1|t|U|4908
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6W6L|1|t|U|4710
6W6L|1|t|C|4711
6W6L|1|t|G|4712
6W6L|1|t|G|4713
6W6L|1|t|U|4714
6W6L|1|t|U|4715
6W6L|1|t|G|4716
*
6W6L|1|t|C|4837
6W6L|1|t|C|4838
6W6L|1|t|U|4839
6W6L|1|t|U|4840
6W6L|1|t|C|4841
*
6W6L|1|t|G|4894
6W6L|1|t|C|4895
6W6L|1|t|A|4896
6W6L|1|t|C|4897
6W6L|1|t|C|4898
6W6L|1|t|G|4899
6W6L|1|t|C|4900
6W6L|1|t|A|4901
6W6L|1|t|C|4902
6W6L|1|t|G|4903
6W6L|1|t|U|4904
6W6L|1|t|U|4905
6W6L|1|t|C|4906
6W6L|1|t|G|4907
6W6L|1|t|U|4908
6W6L|1|t|G|4909
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain G
- 60S ribosomal protein L6
- Chain N
- 60S ribosomal protein L14
- Chain P
- 60S ribosomal protein L13a
- Chain g
- 60S ribosomal protein L35a
Coloring options: