J3_6W6P_002
3D structure
- PDB id
- 6W6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACGGGACUAACA*UGC*GAUUU
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_6W6P_002 not in the Motif Atlas
- Homologous match to J3_4WF9_001
- Geometric discrepancy: 0.1387
- The information below is about J3_4WF9_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_47707.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-cWW-F-F-cSH-cSH-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
6W6P|1|A|A|57
6W6P|1|A|C|58
6W6P|1|A|G|59
6W6P|1|A|G|60
6W6P|1|A|G|61
6W6P|1|A|A|62
6W6P|1|A|C|63
6W6P|1|A|U|64
6W6P|1|A|A|65
6W6P|1|A|A|66
6W6P|1|A|C|67
6W6P|1|A|A|68
*
6W6P|1|A|U|75
6W6P|1|A|G|76
6W6P|1|A|C|77
*
6W6P|1|A|G|110
6W6P|1|A|A|111
6W6P|1|A|U|112
6W6P|1|A|U|113
6W6P|1|A|U|114
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L34
- Chain U
- 50S ribosomal protein L23
- Chain Z
- 50S ribosomal protein L29
Coloring options: