3D structure

PDB id
6W6P (explore in PDB, NAKB, or RNA 3D Hub)
Description
MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CGAUAG*CGCC*GGACG
Length
15 nucleotides
Bulged bases
6W6P|1|B|G|10, 6W6P|1|B|U|12, 6W6P|1|B|C|106
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6W6P|1|B|C|9
6W6P|1|B|G|10
6W6P|1|B|A|11
6W6P|1|B|U|12
6W6P|1|B|A|13
6W6P|1|B|G|14
*
6W6P|1|B|C|66
6W6P|1|B|G|67
6W6P|1|B|C|68
6W6P|1|B|C|69
*
6W6P|1|B|G|103
6W6P|1|B|G|104
6W6P|1|B|A|105
6W6P|1|B|C|106
6W6P|1|B|G|107

Current chains

Chain B
5S rRNA

Nearby chains

Chain A
Large subunit ribosomal RNA; LSU rRNA
Chain X
50S ribosomal protein L27

Coloring options:

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